XRoute Environment: A Novel Reinforcement Learning Environment for Routing

Routing is a crucial and time-consuming stage in modern design automation flow for advanced technology nodes. Great progress in the field of reinforcement learning makes it possible to use those approaches to improve the routing quality and efficiency. However, the scale of the routing problems solved by reinforcement learning-based methods in recent studies is too small for these methods to be used in commercial EDA tools. We introduce the XRoute Environment, a new reinforcement learning environment where agents are trained to select and route nets in an advanced, end-to-end routing framework. Novel algorithms and ideas can be quickly tested in a safe and reproducible manner in it. The resulting environment is challenging, easy to use, customize and add additional scenarios, and it is available under a permissive open-source license. In addition, it provides support for distributed deployment and multi-instance experiments. We propose two tasks for learning and build a full-chip test bed with routing benchmarks of various region sizes. We also pre-define several static routing regions with different pin density and number of nets for easier learning and testing. For net ordering task, we report baseline results for two widely used reinforcement learning algorithms (PPO and DQN) and one searching-based algorithm (TritonRoute). The XRoute Environment will be available at https://github.com/xplanlab/xroute_env.Comment: arXiv admin note: text overlap with arXiv:1907.11180 by other author

Learning A Foundation Language Model for Geoscience Knowledge Understanding and Utilization

Large language models (LLMs)have achieved great success in general domains of natural language processing. In this paper, we bring LLMs to the realm of geoscience, with the objective of advancing research and applications in this field. To this end, we present the first-ever LLM in geoscience, K2, alongside a suite of resources developed to further promote LLM research within geoscience. For instance, we have curated the first geoscience instruction tuning dataset, GeoSignal, which aims to align LLM responses to geoscience-related user queries. Additionally, we have established the first geoscience benchmark, GeoBenchmark, to evaluate LLMs in the context of geoscience. In this work, we experiment with a complete recipe to adapt a pretrained general-domain LLM to the geoscience domain. Specifically, we further train the LLaMA-7B model on over 1 million pieces of geoscience literature and utilize GeoSignal's supervised data to fine-tune the model. Moreover, we share a protocol that can efficiently gather domain-specific data and construct domain-supervised data, even in situations where manpower is scarce. Experiments conducted on the GeoBenchmark demonstrate the the effectiveness of our approach and datasets

Hippo Signaling Suppresses Cell Ploidy and Tumorigenesis through Skp2

大多数真核生物的体细胞是二倍体，即仅含有两组染色体，分别遗传自父本和母本。而一些特定组织如心脏、肝脏等就含有多倍体细胞，特别是肝脏组织含有较高比例的四、八倍体等多倍体细胞。肝脏是人体的重要解毒器官，同时酒精、肝炎病毒等毒性物质或毒性代谢物容易诱发肝细胞的基因突变，多倍体被认为有利于提供代偿性的正常基因来维持肝脏稳态。然而肝脏受损后，多倍体细胞将会受胁迫进行增殖，再生修复受损的肝组织。因此研究机体调控多倍体细胞产生及多倍体细胞进行细胞分裂的调控机理对于理解肝癌的发病机理和肝癌的治疗至关重要。Hippo信号通路在调节组织成体干细胞的分化和增殖，调控器官再生与尺寸大小中具有重要作用。深入研究发现, Hippo信号通路下游效应分子YAP通过AKT-SKP2信号促进二倍体细胞向多倍体转化及多倍体细胞的生长增殖。本项研究阐明了Hippo缺失及YAP激活促进多倍体细胞产生及增殖作为肝癌发生发展中的一个重要机制，为肝癌诊疗提供了新的策略。 周大旺，博士，厦门大学生命科学学院教授、副院长、国家杰出青年基金获得者。【Abstract】Polyploidy can lead to aneuploidy and tumorigenesis. Here, we report that the Hippo pathway effector Yap promotes the diploid-polyploid conversion and polyploid cell growth through the Akt-Skp2 axis. Yap strongly induces the acetyltransferase p300-mediated acetylation of the E3 ligase Skp2 via Akt signaling. Acetylated Skp2 is exclusively localized to the cytosol, which causes hyper-accumulation of the cyclin-dependent kinase inhibitor p27, leading to mitotic arrest and subsequently cell polyploidy. In addition, the pro-apoptotic factors FoxO1/3 are overly degraded by acetylated Skp2, resulting in polyploid cell division, genomic instability, and oncogenesis. importantly, the depletion or inactivation of Akt or Skp2 abrogated Hippo signal deficiency-induced liver tumorigenesis, indicating their epistatic interaction. Thus, we conclude that Hippo-Yap signaling suppresses cell polyploidy and oncogenesis through Skp2.该研究工作获得了国家自然科学基金委、国家重点基础研究发展计划(973)项目、青年千人计划和中央高校基本科研基金的资助。 The Yap (S127A) transgenic mice were kindly provided by Dr. Fernando Camargo from Harvard Medical School, Boston, MA. D.Z. and L.C. were supported by the National Natural Science Foundation of China (31625010,U1505224, and J1310027 to D.Z.; 81422018, U1405225, and 81372617 to L.C.; 81472229 to L.H.), the National Basic Research Program (973) of China (2015CB910502 to L.C.), the Fundamental Research Funds for the Central Universities of China-Xiamen University (20720140551 to L.C. and 2013121034 and 20720140537 to D.Z.)

Hippo信号通路通过调控Skp2活性从而抑制细胞多倍体产生及肝癌发生

文章简介在这项研究中,课题组揭示了Hippo信号通路在限制肝脏细胞的染色体由两倍体向多倍/非整倍体转变过程中起关键作用,该机制异常将导致基因组不稳定继而诱发肝癌的发生发展。课题组通过对Hippo信号通路重要成员(WW45,Mst1/2,Lats1/2)肝脏特异性敲除和过表达国家自然科学基金委;;国家重点基础研究发展计划(973)项目;;青年千人计划;;中央高校基本科研基金的资

Preparation, Characterization, Photochromic Properties, and Mechanism of PMoA/ZnO/PVP Composite Film

A novel photochromic heteropolyacid-based composite film consisting of phosphomolybdic acid (PMoA), ZnO, and polyvinylpyrrolidone (PVP) was fabricated by a sol–gel process. The microstructure and photochromic properties of the PMoA/ZnO/PVP were characterized via Fourier transform infrared spectroscopy (FTIR), transmission electron microscopy (TEM), X-ray photoelectron spectroscopy (XPS), and ultraviolet-visible spectroscopy (UV-Vis). The FTIR spectra showed that the basic structures of ZnO and PVP, and the Keggin structure of PMoA in the PMoA/ZnO/PVP composite film, had not been destroyed during the preparation. The TEM images demonstrated that ZnO presented a rod-like structure, while PMoA was spherical, and many PMoA balls adhered to the surface of the ZnO rods. The XPS spectra of Mo 3d indicated that the valency of Mo atoms in the PMoA/ZnO/PVP was changed by visible light exposure. After visible light irradiation, the PMoA/ZnO/PVP varied from slight yellow to blue, while undergoing an opposite color change upon heating. The discoloration mechanism of the PMoA/ZnO/PVP was consistent with the photoelectron transfer mechanism